Are there a script to make circos plot?

[medvedevgroup]

Are there a script to make circos plot?

[iminkin]

Hi @baizixiansheng ,

There is no such script now. We might add it in the future, but it is very likely that Circos plots made from large outputs will be way too convoluted and hard to read, though it depends a lot on the data. Please also note that SibeliaZ is slightly different from Sibelia: Sibelia is designed to generate large synteny blocks representing long common sequences, while SibeliaZ targets whole-genome alignment and generates much smaller blocks. To get synteny blocks from SibeliaZ, you have to run a postprocessing tool on its output.