megancamilla Goto Github PK
Name: Megan McDonald
Type: User
Company: ANU
Location: Canberra
Megan McDonald's Projects
bio340
Experimental Design, Analysis & Interpretation of Data
cvictoriae_fi3_assembly_annotations
Genome data and annotations for genes and transposons for C. victoriae isolate FI3
fwd_genetics_screen
Collection of scripts for processing re-sequenced UV-mutagenised IPO323 strains
gatk4_zymoseptoria
This is a snakemake workflow that uses GATK4 to call SNPs against Australian Reference Z. tritici WAI332
genome_assembly_mp1
Snakemake workflow to assemble and query short haplotype genomes.
ngs_scripts
Scripts for NGS analysis
python-novice-dna
Software Carpentry introduction to Python for novices using DNA data.
python_intro_anu
python notebooks and example data for bioinformatics-bash-python course run for RSB at ANU
python_intro_anu_rsb
Introduction to Python workshop with heavy emphasis on manipulating DNA data
sanctuary_manuscript
Collection of code used in Sanctuary I: A Starship transposon facilitating the movement of the virulence factor ToxA in fungal wheat pathogens
scripts-work-mac
snakemake-wrappers
This is the development home of the Snakemake wrapper repository, see
transposon-mediated-transfer-of-toxa
These are supplementary files/data/scripts/cfg files for all analyses conducted for this manuscript
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