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Christian von Mering's lab's Projects

bio334 icon bio334

Bio334 Public student repository

flashweave.jl icon flashweave.jl

Inference of microbial interaction networks from large-scale heterogeneous abundance data

mapseq icon mapseq

highthroughput rRNA sequence classification and OTU mapping for metagenomic samples

mapseq-hmp_reanalysis icon mapseq-hmp_reanalysis

This repository contains code used to reanalyse Human Microbiome Project data to benchmark MAPseq.

mltreemap icon mltreemap

accurate Maximum Likelihood placement of environmental DNA sequences into taxonomic and functional reference phylogenies

og_consistency_pipeline icon og_consistency_pipeline

Consistency pipeline for hierarchies of orthologous groups (OGs) based on subsampling and tree reconciliation

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