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Mattias Frånberg's Projects

aspu icon aspu

An R package for adaptive sum of powered score test(ASPU) in genetic association studies.

besiq icon besiq

Genetic interaction analysis

besst icon besst

BESST - scaffolder for genomic assemblies

dose_to_plink icon dose_to_plink

Transposes a minimac dosage file so that it is compatible with Plink.

epibench icon epibench

Benchmark statistical methods for epistasis

epigen icon epigen

Generate plink and/or phenotype data for interaction (epistasis) models

genwalk icon genwalk

Inferring paths between variants using a gene-gene interaction network

getdistr icon getdistr

Helps to calculate observed fragment size distribution for various bioinformatic tools

gplib icon gplib

A naive implementation of Gaussian Process Regression for R

libplinkio icon libplinkio

A small C and Python library for reading PLINK genotype files.

ratatool icon ratatool

A tool for data sampling, data generation, and data diffing

rocmdr icon rocmdr

Extension of MDR based on ROC curves

svsim icon svsim

Simulation toolbox for structural variations.

vale icon vale

:pencil: A markup-aware linter for prose built with speed and extensibility in mind.

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