Comments (1)
I apologize...it looks like -freesurfer_dir addresses this issue. Mea culpa.
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Related Issues (20)
- realpath No such file or directory HOT 1
- How to Specify the data directory? HOT 2
- Adding translation step improves ANTs registration in some datasets HOT 1
- Bugs report for ICA-FIX dependency and ... HOT 5
- FC missing ROIs for all parcellations HOT 2
- -QC fails HOT 5
- -SC does not produce connectome text files HOT 3
- Faild using docker pull for install. HOT 1
- -force flag on proc_dwi deletes proc_structural through post_structural output HOT 1
- -QC_subj does not produce QC report for dwi due to outdated json path HOT 1
- Fastsurfer not running in containerized micapipe v0.2.2 HOT 1
- Mismatch between "dependencies" and software versions HOT 1
- Issue in set-up HOT 11
- Loading prerun fastsurfer HOT 2
- QC_subj terminates early without all outputs HOT 3
- Warning message HOT 1
- FastSurfer tries to run singularity w/in containerized call and fails HOT 4
- Running micapipe after docker pull HOT 15
- Volumetric tSRN HOT 1
- ERROR ]..... B0 threshold is not a valid integrer: DEFAULT HOT 3
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