Comments (1)
Along these lines
ggplot(as.data.frame(colData(tse)), aes(x = time, y=shannon, group = subject)) + geom_line()
but allowing one to easily choose any given numeric colData field, or taxonomic group on the Y axis, as a handy wrapper:
plotSeries(tse, x=time, y=selected.field, group=subject, ....)
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