mmmads Goto Github PK

aparent

APA Regression Net - Predict and Engineer Alternative Polyadenylation

aptardi

aptardi

bam_abs

bcftools

This is the official development repository for BCFtools. To compile, the develop branch of htslib is needed: git clone --branch=develop git://github.com/samtools/htslib.git htslib

bismark

A tool to map bisulfite converted sequence reads and determine cytosine methylation states

bowtie2

A fast and sensitive gapped read aligner

bs3

BS-Seeker3: An Ultra-fast, Versatile Pipeline for Mapping Bisulfite-treated Reads.

bwa

Burrow-Wheeler Aligner for short-read alignment (see minimap2 for long-read alignment)

bwa-meth

fast and accurate alignment of BS-Seq reads

bwa-pssm

A burrows-wheeler transform-based probabilistic short read mapper.

chinese_nlp

中文自然语言处理入门实战课程语料

course-of-biological-intelligence

Course of biological intelligence

crmapp

dapars

DaPars(Dynamic analysis of Alternative PolyAdenylation from RNA-seq)

deepcpg

Deep neural networks for predicting CpG methylation

deepmod

DeepMod: a deep-learning tool for genomic-scale, strand-sensitive and single-nucleotide based detection of DNA modifications

deepram

End-to-end deep learning toolkit for predicting protein binding sites and motifs.

deepsignal

Detecting methylation using signal-level features from Nanopore sequencing reads

dlaicourse

Notebooks for learning deep learning

dnabert

DNABERT: pre-trained Bidirectional Encoder Representations from Transformers model for DNA-language in genome

docker-rrbssim

A version of RRBSsim as a Docker image including RRBSsim and all its dependencies and library required.

emase

Expectation-Maximization algorithm for Allele-Specific Expression

fab-phmm

python implementation of FAB-PHMM

gdsl

The Generic Data Structures Library from http://home.gna.org/gdsl/

lab1

lab1-1

lab2

lab4

软件工程实验3推送

lab4-recommender-systems

learning-notes