Comments (3)
Hi Candice,
Interesting. I would recommend indexing the .bam file yourself before running inStrain and see if that fixes the problem. You can do this with the commend samtools index $bam
.
Please let me know if this does or does not fix the problem.
Thanks,
Matt
from instrain.
This worked! Thanks for your suggestion!
Candice
from instrain.
Great! Glad it worked
from instrain.
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