mschoettner Goto Github PK

abide-fmri

Repository for the Brainhack School 2020 team working with fMRI and ABIDE data to train machine learning models.

bids_script

Script to get data from the folder into BIDS

brainhack_visualization

Repo to host the interactive plot that is the deliverable of week 3 of the brainhack 2020.

connectomemapper3

Connectome Mapper 3 is a BIDS App that implements full anatomical, diffusion, and resting/state functional MRI processing pipelines, from raw T1 / DWI / BOLD data to multi-resolution brain parcellation with corresponding connection matrices.

diagnostics-connectomics

ds001907-edu

Fork of the original OpenNeuro dataset, in order to make proper BIDS for the ReproNim/OHBM 2022 Educational course.

first-validation

hackzurich2020-17

Repository for our project at HackZurich2020

hcp_datalad

internship_fps

interpret-iqms

Interpreting the IQMs of MRIQC

master-thesis

Code for my Master thesis "Psychopathic Traits and Social Cognition: Effective Connectivity in Theory of Mind and Empathy Networks".

midtermproject

mschoettner.github.io

My personal website.

ohbmeducation-2022

Repo for the OHBM Education 1/2 day course entitled: "How to Write a Re-Executable Publication"

openscienceguide

This is a short introductory guide on how to do neuroimaging studies using open research practices. Focus lies on introducing the tools and why you should use them. A lot of helpful resources are linked that describe each tool in more detail.

papers

A repository for my cool paper (and for teaching git)

pymc-resources

PyMC educational resources

rs-autoregression-prediction

Autoregressive model on resting state time series benchmark

schoettner-m-qlsc612