Comments (1)
Hi ktyssowski,
It does look like there are either too many cells or too many genes (I can't remember if this particular function uses cells or genes, I would have to look deeper into the source code) but the error is being thrown by the xlmhg package. Since COMET runs on a cluster-by-cluster basis, I'm not entirely sure if the issue is with the number of cells. How many genes are you testing? And is this run on a filtered dataset?
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Related Issues (13)
- Error when running example data: "XLMHG error" HOT 7
- Unable to install COMETSC HOT 8
- Error when using sample data HOT 1
- COMET with Integrated Data? Normalization Method suggestions? HOT 2
- installation error
- Input matrix - raw or normalized? HOT 1
- Explanation of output HOT 1
- Web version - 3 and 4 marker panels HOT 1
- TypeError: ufunc 'isnan' not supported HOT 2
- unable to install because: No matching distribution found for matplotlib==3.0.0 (from COMETSC) HOT 1
- COMETSC running but not giving output HOT 12
- Confusion about ranks HOT 2
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