mullinslab Goto Github PK
Name: Mullins Lab
Type: Organization
Bio: Mullins Lab at the University of Washington
Location: Seattle, WA
Name: Mullins Lab
Type: Organization
Bio: Mullins Lab at the University of Washington
Location: Seattle, WA
A workflow and toolkit of perl scripts for selecting rev-env variants for synthesis
A workflow and toolkit of perl scripts to manipulate multiple sequence alignments
A bridge between File objects and your AngularJS components
A generic component for maintaining the sort state of a set of sortable fields, e.g. table columns.
A collection of record-handling tools related to biology
Build recs pipelines in Perl instead of shell
Parse CIGAR strings and translate coordinates to/from reference/query
Locate sequences within HIV using LANL's web tool via a JSON web API or Perl library
Concise response constructors for Catalyst controllers
A Catalyst view for pre-processing Vega specs
snakemake pipeline to demultiplex PacBio reads using Index sequences added during PCR
This is a repository of R code that clusters sequence data using the GAP procedure and K-mediods clustering. The input is a folder containing fastA files for all the data within a project. The output is a collection of files containing the sequence-to-cluster-ID for each clustering run (e.g. the GAP procedure, and various K's in K-mediod clustering).
A tool to summarize the NGS read count stats at each stage of a pipeline
An external CSV data connection for Excel
A quick Phred+33 quality score explainer
FigTree modified with more command line configuration options. For use in pipelines/automation.
Fixing bugs
Geneious runner for plugin developers
R scripts used in publication: Genomic changes in Kaposi Sarcoma-associated Herpesvirus and their clinical correlates
Automate LANL's HIV mutation-highlighting tool
HIV-1 Reservoirs Integration Sites
HIV-1 Reservoirs Integration Sites
Indel and carry-forward error corrections for next-generation sequencing data
A toolkit for creating databases of viral integration sites in host genomes
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.