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Muniba Faiza's Projects

dssp_parser icon dssp_parser

This package parses DSSP files and fetch all helices in separate files.

free_energy_landscape-md icon free_energy_landscape-md

A Python package to generate free energy landscape (FEL) of molecular dynamics (MD) trajectory obtained from GROMACS. It also extracts the time frames corresponding to the minima regions in the FEL.

hyphy icon hyphy

HyPhy: Hypothesis testing using Phylogenies

som_matlab icon som_matlab

Scripts to perform Self-Organizing Maps (SOM) in MATLAB

tanimoto_similarities icon tanimoto_similarities

Python script to perform fingerprinting and calculate Tanimoto similarities on multiple compounds.

vs-analysis icon vs-analysis

VS-Analysis: A Python Script to Analyze Virtual Screening Results of Autodock Vina

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