Comments (2)
It would not surprise me to learn that there were a cast to float somewhere. It's really hard to say without seeing a reproducible example / full traceback, but the shape in your error message doesn't correspond to the shape of your data so that makes me think it's part of the scipy algorithm.
I'll also note that a clustermap with 100k rows is going to be misleading in the sense that your monitor will only have 1k or so pixels to show it with, so it's going to get very aggressively downsampled.
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This has been addressed in the scipy repo where the casting occurs:
scipy/scipy#19707
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