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Mathew Rees's Projects

2019_big_data_biogeography icon 2019_big_data_biogeography

General info, scripts and lectures for the 2019 Physalia course "Big data Biogeography" in Berlin. You can find more information on the webpage for the course: https://idiv-biodiversity.github.io/2019_big_data_biogeography/

aster icon aster

Accurate Species Tree EstimatoR series: a family of optimation algorithms for species tree inference implemented in C++ (including ASTRAL-Pro & Weighted ASTRAL)

biogeobears icon biogeobears

BioGeography with Bayesian (and likelihood) Evolutionary Analysis with R Scripts

captus icon captus

Assembly of Phylogenomic Datasets from High-Throughput Sequencing data

forest-savanna-diversity icon forest-savanna-diversity

Scripts for Rees et al. 2023. Testing Whiteโ€™s Floristic Impoverishment Hypothesis in the Forest-Savanna Transition Zones of Africa

paubrasil icon paubrasil

Rees et a. (in prep.) American Journal of Botany

sdm_r_packages icon sdm_r_packages

A curated list of R packages used in species distribution modelling

targeted_enrichment icon targeted_enrichment

Scripts and outline of pipeline to generate robust consensus sequence from targeted captured reads

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