nandr0id Goto Github PK
Name: Nandita R
Type: User
Company: Noblis
Bio: Comp Bio/Bioinformatics/Generative Art/and HIV-Vaccine Researcher. Other interests: 3D-printing, Bioprinting
Location: Washington, DC
Nandita R's Projects
auto_process_ngs
Scripts and utilities for automatic processing & management of Illumina NGS sequencing data.
galaxy-tools
FLS Galaxy tools and tool-wrappers for in-house and third-party bioinformatic applications.
gatk3-4-rnaseq-germline-snps-indels
Workflows for processing RNA data for germline short variant discovery with GATK (v3+v4) and related tools
genomics
Scripts, utilities and programs for genomic bioinformatics.
intro-to-r-with-dge
mixcr
MiXCR is a universal software for fast and accurate extraction of T- and B- cell receptor repertoires from any type of sequencing data. Free for academic use only.
oneliners
Useful bash one-liners for bioinformatics.
perl
PERL code examples
python
r
R scripts for data wrangling
seurat
R toolkit for single cell genomics
snpeff
vdjtools
Post-analysis of immune repertoire sequencing data
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