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3d-caffe

3dseg

Volumetric segmentation using a V-Net model

asap

Program for the analysis and visualization of whole-slide images in digital pathology

attention-gated-networks

Use of Attention Gates in a Convolutional Neural Network / Medical Image Classification and Segmentation

bayes-cnn

brats2018-tumor-segmentation

We provide DeepMedic and 3D UNet in pytorch for brain tumore segmentation. We also integrate location information with DeepMedic and 3D UNet by adding additional brain parcellation with original MR images.

camelyon

The solution to cameyon16 and camelyon17 challenge and also to your own WSI data project.

capsnetslaseg

Capsule Networks and Convolutional Neural Networks for the Automated Segmentation of Left Atrium in Cardiac MRI

cnn_bayes_bbh

Comparing the use of convolutional neural networks (CNN) to the optimal Bayesian statistic, the Bayes factor.

deep-learning-for-medical-applications

Deep Learning Papers on Medical Image Analysis

deepmedic

Efficient Multi-Scale 3D Convolutional Neural Network for Brain Lesion Segmentation

dltk

Deep Learning Toolkit for Medical Image Analysis

eeg

goliath

Goliath is a non-blocking Ruby web server framework

image_segmentation

pytorch Implementation of U-Net, R2U-Net, Attention U-Net, Attention R2U-Net.

isda-for-deep-networks

An efficient implicit semantic augmentation method, complementary to existing non-semantic techniques.

magic-vnet

VNet for 3d volume segmentation

mask-rcnn

A PyTorch implementation of the architecture of Mask RCNN, serves as an introduction to working with PyTorch

mask_rcnn

Mask R-CNN for object detection and instance segmentation on Keras and TensorFlow

medicaldetectiontoolkit

The Medical Detection Toolkit contains 2D + 3D implementations of prevalent object detectors such as Mask R-CNN, Retina Net, Retina U-Net, as well as a training and inference framework focused on dealing with medical images.

medicaltorch

A medical imaging framework for Pytorch

medpy

Medical image processing in Python

modelsgenesis

Official Keras Implementation and Pre-trained Models for Models Genesis - MICCAI 2019

niftynet

[unmaintained] An open-source convolutional neural networks platform for research in medical image analysis and image-guided therapy

parkinsons-3d-cnn-bayesian-network

Winner for #PoweredByTF 2.0 Challenge!

pulmonary-nodules-segmentation

Tianchi medical AI competition [Season 1]: Lung nodules image segmentation of U-Net. U-Net训练基于卷积神经网络的肺结节分割器

python-100-days

Python - 100天从新手到大师

pytorch-unet

PyTorch implementation of the U-Net for image semantic segmentation with high quality images

segloss

A collection of loss functions for medical image segmentation

sota-medseg

SOTA medical image segmentation methods based on various challenges