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Nate Olson's Projects

admiral icon admiral

Simple python high-performance computing cluster batch submission

adotto-smk icon adotto-smk

A snakemake based pipeline to build Adotto TR databases

benchmarking-tools icon benchmarking-tools

Repository for the GA4GH Benchmarking Team work developing standardized benchmarking methods for germline small variant calls

canu icon canu

A single molecule sequence assembler for genomes large and small.

defrabb icon defrabb

Development Environment For Assembly Based Benchmarks

galaxy-hackathon-2014 icon galaxy-hackathon-2014

Instructions to add a tool for using BAYSIC in galaxy using Docker for installing dependencies

genome-data-integration icon genome-data-integration

Methods to integrate data from multiple genome sequencing datasets and form consensus variant calls

genomic_purity icon genomic_purity

characterization of test material purity using whole genome sequencing data

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