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test_cli.py about master_gff3_parser HOT 2 OPEN

ncbi-hackathons avatar ncbi-hackathons commented on June 16, 2024
test_cli.py

from master_gff3_parser.

Comments (2)

childers avatar childers commented on June 16, 2024

@manny809dr can you paste your path and sample commands?

from master_gff3_parser.

manny809dr avatar manny809dr commented on June 16, 2024

`from cli import command
from tests.test_utilities import Capturing
from cli.assembly import fetch_assembly_report, get_mapper, convert, converter

def test_fetch_GRCh38():
url = fetch_assembly_report("GRCh38")
print(url)
assert not url == "gasdf"
assert url == "http://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.26_GRCh38/GCF_000001405.26_GRCh38_assembly_report.txt"

def test_get_mapper():
assert get_mapper("http://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/000/001/405/GCF_000001405.26_GRCh38/GCF_000001405.26_GRCh38_assembly_report.txt")

def test_convert():
assert convert()

def test_converter():
assert converter()

from master_gff3_parser.

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