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Nermin Ghith's Projects

ancom icon ancom

R scripts for Analysis of Composition of Microbiomes (ANCOM).

ancom-bc-code-archive icon ancom-bc-code-archive

Data, scripts, and outputs for the Nat. Comm. paper "Analysis of Composition of Microbiomes with Bias Correction"

argprofiler icon argprofiler

A pipeline for for large-scale analysis of antimicrobial resistance genes and their flanking regions in metagenomic datasets

bio-pharmaceutical-analytics icon bio-pharmaceutical-analytics

Design of experiments; safety data analytics tools; Intelligence solutions for clinical development, PK-PD models and ; QC processes .... etc

bulkdgd icon bulkdgd

Code, documentation, and tutorial for the DGD model trained on bulk RNA-Seq data.

camisim icon camisim

CAMISIM: Simulating metagenomes and microbial communities

corncob icon corncob

Count Regression for Correlated Observations with the Beta-binomial

covid icon covid

COVID 19 - Convert a Jupyter Notebook into a Dashboard

d3 icon d3

Bring data to life with SVG, Canvas and HTML. :bar_chart::chart_with_upwards_trend::tada:

dash-docs icon dash-docs

:book: The Official Dash Userguide & Documentation

dash-px icon dash-px

Simple Dash app using Plotly Express

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