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neurodroid

NEURON on Android

This is a port of the NEURON simulation environment to arm/Android. It consists of:

  • Patches to the NEURON source code and scripts to cross-compile NEURON for arm/Android on a Linux host.
  • An Android application including the prebuilt binaries to control NEURON from a graphical user interface.

Installation

neurodroid is available from the Android Market: http://market.android.com/details?id=csh.neurodroid

Or from here.

Build

See BuildInstructions.

Benchmark

CPU Clock speed Time
NVidia Tegra 2, vfp extensions enabled, -O3 1.0 GHz 5.10s
NVidia Tegra 2, vfp extensions enabled, -O3 1.2 GHz 4.21s
NVidia Tegra 2, no vfp support, -O2 1.0 GHz 6.18s
TI OMAP 4430, vfp extensions enabled, -O3 1.0 GHz 5.11s
TI OMAP 4430, no vfp support, -O2 1.0 GHz 6.14s
Intel Xeon E5530 2.4 GHz 0.52s

Christoph Schmidt-Hieber's Projects

constrained_nmf icon constrained_nmf

Python implementation of a source extraction and spike inference algorithm for large scale calcium imaging data analysis, based on a constrained matrix factorization approach.

darkmode icon darkmode

Invert luminance of image files without changing colours for presentations in dark mode

deeplabcut icon deeplabcut

Markerless pose estimation of user-defined features with deep learning for all animals, including humans

encfs icon encfs

EncFS: an Encrypted Filesystem for FUSE.

gnoom icon gnoom

A collection of virtual-reality tools for biomedical research

keras icon keras

Deep Learning library for Python. Convnets, recurrent neural networks, and more. Runs on Theano or TensorFlow.

opencv icon opencv

Open Source Computer Vision Library

phoenix icon phoenix

wxPython's Project Phoenix. A new implementation of wxPython, better, stronger, faster than he was before.

sh2017 icon sh2017

Code accompanying Schmidt-Hieber et al., 2017

sima icon sima

Python package for analysis of dynamic fluorescence microscopy data

stimfit icon stimfit

A program for viewing and analyzing electrophysiological data

suite2p icon suite2p

cell detection in calcium imaging recordings

tdmsreader icon tdmsreader

C++ code to read a TDMs from National Instruments

thunder icon thunder

Large-scale neural data analysis with Spark

truecrypt icon truecrypt

TrueCrypt ported to wxWidgets 3.0, and some patches to build a 64-bit version on OS X.

wxpython icon wxpython

wxPython is a wrapper around wxWidgets for the Python language. This is the repository for "Classic" wxPython. All new development is happening in the Phoenix project at https://github.com/wxWidgets/Phoenix

zh2021 icon zh2021

Simulation code accompanying Zhang et al 2021

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