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kaczmarj avatar kaczmarj commented on June 15, 2024 1

hi @seldamat - sorry for the delay, and thanks for the report. can you try updating nobrainer and try the above code again?

pip install -U --no-cache-dir https://github.com/neuronets/nobrainer/tarball/master

that might update dependencies, too, so it's best to do in a virtual environment or conda environment.

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kaczmarj avatar kaczmarj commented on June 15, 2024 1

FYI i have enhanced the tfrecords writing and reading functionality in #79. can you please refer to https://github.com/neuronets/nobrainer/blob/master/guide/transfer_learning.ipynb for how to write and read tfrecords in the new format?

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kaczmarj avatar kaczmarj commented on June 15, 2024 1

@seldamat - let me know if you have any updates

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hebbianloop avatar hebbianloop commented on June 15, 2024

Update, not sure how this happened but I get this error message when attempting to call no brainer from the command line

  File "/Users/admin/Anvil/opt/miniconda3/lib/python3.7/site-packages/pkg_resources/__init__.py", line 786, in resolve
    raise DistributionNotFound(req, requirers)
pkg_resources.DistributionNotFound: The 'cloudpickle==1.1.1' distribution was not found and is required by tensorflow-probability

update - performed a reinstall and this message mysteriously disappeared. the original reported behavior is still present

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