neurospin-projects Goto Github PK

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Name: NeuroSpin - Projects

Type: Organization

Bio: Neuroimaging research centre

Location: France

Blog: https://joliot.cea.fr/drf/joliot/Pages/Entites_de_recherche/NeuroSpin.aspx

NeuroSpin - Projects's Projects

2021_adneves_skelegan

Learn human sulcus variability using GAN

2021_cpoiret_hsf

Hippocampal Segmentation Factory (HSF). A one-liner Deep Learning tool to segment raw T2w (and T1w) MRIs into hippocampal subfields in few seconds. Trained on 700+ manually segmented hippocampi.

2021_jchavas_dicofolding

Characterize cortical folding patterns around Superior Temporal Sulcus thanks to contrastive learning tools

2021_jchavas_lguillon_deepcingulate

Compare beta-VAE and SimCLR to detect sulcus patterns in the cingulate region

2021_rlouiset_ucsl

UCSL: Unsupervised Clustering driven by Supervised Learning

2021_zramzi_fastmri

Try several methods for MRI reconstruction on the fastmri dataset. Home to the XPDNet, runner-up of the 2020 fastMRI challenge.

2021_zramzi_tfkbnufft

A robust, easy-to-deploy non-uniform Fast Fourier Transform in TensorFlow.

2022_bdufumier_smlvsdl

Reproducing results described in "Deep Learning Improvement over Standard Machine Learning in Anatomical Neuroimaging comes from Transfer Learning"

2022_cambroise_interpret_multivae

Mixture-of-Products-of-Experts (MoPoE) VAE

2022_cambroise_surfaugment

MICCAI 2022: data augmentation on the surface - application to contrastive learning.

2022_jchavas_cingulate_inhibitory_control

Use contrastive learning to predict cognitive parameters from skeletons

2022_lguillon_rare_folding_detection

Identification of rare cortical folding patterns based on an unsupervised deep learning approach

2022_pauriau_unetsulc

UNet for automatic labelling of chimpanzee cortical sulci

2023_agaudin_jchavas_folding_supervised

Supervised learning on folding skeleton crops

2023_asm_tembedding

Consistent time embeddings of high-dimensional fMRI recordings using auxiliary variables.

2023_educhesnay_localizer_predict-age

Toy ML example: predict age on localizer data

2023_pauriau_contrastiveskeleton

Contrastive learning on sulci skeleton

2023_pauriau_diag_pred_from_sulci

Supervised Diagnosis Prediction from Cortical Sulci: Toward the Discovery of Neurodevelopmental Biomarkers in Mental Disorders

2023_rlouiset_deep_ucsl

GitHub repository of the code and examples of Deep UCSL.

2024_rlouiset_sep_clr

SepCLR is a Contrastive Learning methods made to address Contrastive Analysis paradigm.

brain_age_deep

Predict age from brain anatomy measures of Grey Matter (GM) volumes using Deep Learning.

Age prediction with site-effect removal: A challenge on the openBHB dataset that aims to i) predict age from derived 3D T1w anatomical MRI data while ii) removing site/scanner information from the learned representation.

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