Comments (1)
There are now tests for all deeptools
tools
from modules.
Related Issues (20)
- Investigate issue extracting minigut_cf.tar.gz for centrifuge
- Investigate issue extracting data.tar.gz for rgi related modules HOT 1
- Investigate unknown issue for checkv/updatedatabase module
- new module: pypgx/createinputvcf
- Fix malt tests that are using a 739.0 MiB zip as input HOT 7
- new module: pypgx/preparedepthofcoverage
- new module: pypgx/computecontrolstatistics
- new module: pypgx/runngspipeline
- Remove tags.yml files if we are sure we no longer need them HOT 1
- new module: MSISENSORPRO/MSISENSORPRO_SOMATIC_TUMORONLY
- Investigate why `subworkflows/nf-core/fastq_align_hisat2` tests were not triggered
- snpeff security issue HOT 3
- [FEATURE] add stub and tests to lofreq/filter
- new module: SENTIEON/QUALCAL
- Standardized channel output for different files HOT 1
- new module: DIAMOND/CLUSTER
- new module: REPEATMASKER HOT 2
- new module: BRAKER3 HOT 1
- update module: FCS/FCSGX
- Minor bug: krakentools/combinekreports incorrect description
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from modules.