Comments (3)
Don't have any objections, but why would you need to do that? If a process fails it should start in a new work directory the next time.
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For debugging: going to that working directory and re-running the job (bash .command.run
).
Definitely just a nice-to-have.
from scrnaseq.
Feel free to submit a PR to the modules repo!
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Related Issues (20)
- Sample merging does not work if files are named the same
- 'star' in genome configrations ignored HOT 2
- Cellranger mkref resource flags incorrect HOT 3
- Error with CONCAT_H5AD HOT 3
- Running 'cellranger-arc count' with existing genome index
- cellranger-multi implementation follow-up
- Trimming R1 fast files in all aligners HOT 4
- Time limit of AlevinQC HOT 3
- Specify cellranger version HOT 1
- scrnaseq will not recognize my genome file path HOT 2
- `--cellranger_index` only appears to work if `--validate_params false` provided HOT 3
- cellranger_count.py: capture stderr and stdout HOT 4
- Implement sample demultiplexing followed by VDJ + feature barcode analysis per sample HOT 5
- pipeline not compatible with nextflow 23 => PosixFileAttributeView HOT 1
- cellranger count => Your reference does not contain the expected files HOT 2
- Error while excuting emptydrops HOT 1
- nextflow inspect does not work due to missing parameters HOT 2
- Support for 10x Gem-X V4 libraries HOT 5
- Tests are not executed HOT 3
- Standardize h5ad/seurat var gene annotations across aligners HOT 1
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