nkran Goto Github PK
Name: Nace Kranjc
Type: User
Company: @ImperialCollegeLondon
Twitter: nacenace_
Location: London, UK
Nace Kranjc's Projects
agamp4_conservation_score
Conservation score calculated for Anopheles gambiae genome AgamP4.
azimuth
Machine Learning-Based Predictive Modelling of CRISPR/Cas9 guide efficiency
crispresso2
Analysis of deep sequencing data for rapid and intuitive interpretation of genome editing experiments
decaf-frontend
decaf-frontend-common
escher
Build, view, share, and embed pathway maps.
flask-vuejs-template
Flask + Vue JS Template
genomic_read_processing
A nextflow pipeline developed to trim and map genomic reads to the Anopheles gambiae reference genome. This pipeline was originally developed for the Crisanti Lab.
guido
CRISPR sgRNA search and evaluation Python package.
guido-old
Guide designer with microhomology predictor for MMEJ
hybrids
maftools
Bioinformatics tools for dealing with Multiple Alignment Format (MAF) files.
malariagen-data-python
A Python package providing convenience functions for accessing MalariaGEN data.
module-pathways
module-theoretical-yield
notebooks
Notebooks
pam-identification
Scripts and tools used for in silico CRISPR-Cas9 PAM identification.
pipes
Pipes
resolwe-bio
Bioinformatics pipelines for Resolwe
resolwe-bio-py
Resolwe Bioinformatics Python API
rnaseq_tutorial
rnaseq_variant_calling
taco
Multi-sample transcriptome assembly from RNA-Seq
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