nmshahir Goto Github PK
Name: Nur M Shahir
Type: User
Bio: Translational Bioinformatician by Training | Data Scientist, evidently
Twitter: Gigiomics
Blog: nmshahir.com
Name: Nur M Shahir
Type: User
Bio: Translational Bioinformatician by Training | Data Scientist, evidently
Twitter: Gigiomics
Blog: nmshahir.com
Charts made for 30 Days of Charts 2023 Challenge
Simple statistical identification and removal of contaminants in marker-gene and metagenomics data
A fast, scalable, and accurate local ancestry method, with updated requirements.txt file
Github Tutorial Repos
Microbial Aerotolerance Database
Causal Associations from Metabolite Data
Tools for metagenomics analysis
An assortment of scripts to help process and automate various microbiome and metagenomic bioinformatic tools.
Testing this pipeline
phyloseq is a set of classes, wrappers, and tools (in R) to make it easier to import, store, and analyze phylogenetic sequencing data; and to reproducibly share that data and analysis with others. See the phyloseq front page:
This is the development home of the Snakemake wrapper repository, see
Collection of infrequently lore and references updated from campaign so I can stop asking Ari "who is X? again"
TADA - Targeted Amplicon Diversity Analysis - a DADA2-focused Nextflow workflow for any targeted amplicon region
The script presents a simple way to visualize features on human and other species chromosome ideograms
Collection of visualizations and data analyses from rfordatascience tidy tuesday
viGEN - A bioinformatics pipeline for the exploration of viral RNA in human NGS data
A bioinformatics pipeline for viral transcriptome detection and quantification considering splicing.
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.