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genomic_data_pseudomonas

Genomic data of Pseudomonas sp. isolated from municipal sewage water

genomics_resources_cosmospora_magnaporthe_oryzae

Genomics resources for two interacting fungi - Cosmospora sp. and Magnaporthe oryzae

gentools

Genetics and Genomics Analysis Tools

geo2enrichr

A browser extension and web application for extracting gene sets from GEO and piping them to Enrichr.

getting-started-with-genomics-tools-and-resources

Unix, R and python tools for genomics and data science

gffcompare

classify, merge, tracking and annotation of GFF files by comparing to a reference annotation GFF

gffread

GFF/GTF utility providing format conversions, region filtering, FASTA sequence extraction and more

giggle

Interval data structure

github-readme-stats

:zap: Dynamically generated stats for your github readmes

gmiec-shiny

This is the offical repository of GMIEC-shiny

gnomad-browser-toolkit

A collection of reusable components and tools for building genomic data browsers

gnomad_browser

gnomAD browser pre-ASHG 2018

gnomad_db

This package scales the huge gnomAD files to a SQLite database, which is easy and fast to query. It extracts from a gnomAD vcf the minor allele frequency for each variant.

gnomad_python_api

🧬 gnomAD Python API is used to obtain data from gnomAD (genome aggregation database).

gofeat

GO FEAT: a rapid web-based functional annotation tool for genomic and transcriptomic data

goleft

goleft is a collection of bioinformatics tools distributed under MIT license in a single static binary

googlegenomics

An R package for Google Genomics API queries.

grabix

a wee tool for random access into BGZF files.

graph2gauss

Gaussian node embeddings. Implementation of "Deep Gaussian Embedding of Graphs: Unsupervised Inductive Learning via Ranking".

graphalignmentviewer

graphbio

GraphBio: a shiny web app to easily perform popular visualization analysis for omics data

grid-engine

An exceptional plugin for grid-based features in the Phaser 3 framework.

gridss

GRIDSS: the Genomic Rearrangement IDentification Software Suite

gwas_papers

Important articles on GWAS with human disease types

hands-on-machine-learning-with-scikit-learn

he2rna_code

Train a model to predict gene expression from histology slides.

hexfiend

A fast and clever hex editor for macOS

hgvs

HGVS variant name parsing and generation

hmg2d-analyzer

Java based bioinformatics tool to find relationships between human miRNA, gene, drug and disease.

homebrew-cask

🍻 A CLI workflow for the administration of macOS applications distributed as binaries