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Name: Bhavya Papudeshi
Type: User
Company: Flinders University
Twitter: BhavyaPapudeshi
Name: Bhavya Papudeshi
Type: User
Company: Flinders University
Twitter: BhavyaPapudeshi
Atavistic processing of metagenomics data.
A simpler version of atavide that relies only on slurm or PBS scripts. Some of the settings maybe specific for our compute resources
Scripts and code used for genome assembly of bacterial sequences
Conda recipes for the bioconda channel.
This repository holds the scripts used to analyse symbiont, X. bovienii genomes
short read annotation for taxonomic and gene functions
The FAME Website
Automated long-read first bacterial genome assembly tool implemented in Snakemake using Snaketool.
Kraken output generates a report for each datasets, this script takes these individual output and combines it to one file, where each column is number of reads that were rooted to this taxon (column 2 in summary)
Workflow to build metagenome assembled genomes (MAG) from shotgun sequenced metagenomes.
work in progress. but got to do with phage genomes because they are awesome!
Comparisons of multiple different prophage predictions
Take output from multiple samples and adds them to one table at the end
NEW!!! Phage annotations and predictions. A spae is a prediction or foretelling. We'll foretell you what your phage is doing!
bacterial assembly and annotation
FAME Metagenomics workshop 2022
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.