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Youssef darzi's Projects

biomio icon biomio

Lightweight, portable library for working with HDF5 BIOM files using Java.

fastngsadmix icon fastngsadmix

Program for estimating admixture proportions and doing principal component analysis of a single NGS sample

haplogrep-cmd icon haplogrep-cmd

HaploGrep - mtDNA haplogroup classification. Supporting rCRS and RSRS.

omixer-rpmr icon omixer-rpmr

An R interface to the omixer-rpm for turning metagenomic functional profiles into pathway/module profiles

pharmcat icon pharmcat

The Pharmacogenomic Clinical Annotation Tool

qmp icon qmp

Quantitative Microbiome Profiling

rust-bio icon rust-bio

This library provides implementations of many algorithms and data structures that are useful for bioinformatics. All provided implementations are rigorously tested via continuous integration.

snappy icon snappy

A fast y-haplogroup caller for SNP data

wdl icon wdl

Workflow Description Language - Specification and Implementations

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