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Comments (7)

jpfeuffer avatar jpfeuffer commented on June 29, 2024

Raw file converter needs the Openms thirdparty plugin.

from openms.

poshul avatar poshul commented on June 29, 2024

Yup. I've got that installed.

from openms.

jpfeuffer avatar jpfeuffer commented on June 29, 2024

I don't remember the details of how this was implemented.

from openms.

poshul avatar poshul commented on June 29, 2024

I checked the Binaries.ini for the thirdparty package, per https://github.com/genericworkflownodes/GenericKnimeNodes/wiki/How-to-handle-missing-binaries . It looks like the link to the ThermoRawFileParser folder is still there, and the folder has the executable in it.

It's not the end of the world, as I can still get the functionality by pushing the ThermoRawFileParser.exe from a file importer node to the FileConverter.

from openms.

jpfeuffer avatar jpfeuffer commented on June 29, 2024

Failed to find matching binary means that the adapter exe is not found in the plugin.

Code is here:

# Note: We expose FileConverter twice.

from openms.

jpfeuffer avatar jpfeuffer commented on June 29, 2024

Binaries.ini are for the third party exes.
Where do you get the thermorawparser.exe from. The idea is that they are included in the knimw third party plugin. No external exe needed.

from openms.

jpfeuffer avatar jpfeuffer commented on June 29, 2024

There probably needs to be an extra copy for FileConverter into the TPplugin here:

if(${TOOL} IN_LIST THIRDPARTY_ADAPTERS)

from openms.

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