Giter Site home page Giter Site logo

orsburn's Projects

alpha-tri icon alpha-tri

Using the predicted spectral to calculate the intensity similarity and improve the identification of DIA data

alphatims icon alphatims

An open-source Python package for efficient accession and analysis of Bruker TimsTOF raw data from the Mann Labs at the Max Planck Institute of Biochemistry.

batmass icon batmass

Mass spectrometry data visualization

compbio-base icon compbio-base

A C# solution with projects containing utiliy classes that are used e.g. in MaxQuant and Perseus

copynumber icon copynumber

Simple tools for comparing proteomics accessions to protein absolute copy number data

diann icon diann

DIA-NN - a fast and easy to use tool for processing data-independent acquisition (DIA) proteomics data

didarscpqc icon didarscpqc

Diagnostic Ion Data Analysis Reduction Adopted as a QC Pipeline for Multiplexed Single Cell Proteomics (SCoPE-MS)

do-ms icon do-ms

Modular and extensible visualization of mass-spec data

drawalignr icon drawalignr

An R package for the visualization of aligned ms2 chromatograms.

eggnogfastabuilder icon eggnogfastabuilder

Python script by ChatGPT4 which allows EggNoG protein annotations to be made the accession in protein FASTA files

fragpipe icon fragpipe

A cross-platform Graphical User Interface (GUI) for running MSFragger and Philosopher - powered pipeline for comprehensive analysis of shotgun proteomics data

hitmap icon hitmap

An R package of High-resolution Informatics Toolbox for Maldi-imaging Proteomics

ipsa icon ipsa

The Interactive Peptide Spectral Annotator

lazyphosphonormalizer icon lazyphosphonormalizer

A simple sheet that adjust phosphopeptide abundance against the whole protein levels in proteomics data

metamorpheus icon metamorpheus

Proteomics search software with integrated calibration, PTM discovery, bottom-up, top-down and LFQ capabilities

moff icon moff

A modest Feature Finder (moFF) to extract MS1 intensities from Thermo raw file

openscp icon openscp

Rapid single cell proteomics preparation using a simple opensource robotics platform

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.