pathwaycommons Goto Github PK
Name: Pathway Commons
Type: Organization
Bio: A network biology resource for biological pathway information and software.
Location: Toronto, New York City, Boston, Portland
Pathway Commons's Projects
about
Pathway Commons Home Page (/about/)
app-ui
Web UI for accessing Pathway Commons data
biojs-pcviz
BioJS component for PCViz
chibe
Pathway visualization and analysis tool for Pathway Commons and other BioPAX data
chilay-sbgn
Chisio Layout (ChiLay) graph layout framework for SBGN
classifier-pipeline
A workflow for classifying articles
cpath1
cPath: old Pathway Commons portal engine
cpath2
Biological pathway data integration and access platform (Pathway Commons)
cpath2-client
csndb-to-biopax
ctd-to-biopax
Comparative Toxicogenomics Database (CTD) to BioPAX Level3 data converter.
cypath2
Cytoscape 3 app that connects to PC2 (cpath2) and imports BioPAX sub-networks into Cytoscape 3 for analysis.
cytoscape-sbgn-stylesheet
View biological networks via Cytoscape.js and sbgn-ml
drugbank-to-biopax
DrugBank to BioPAX Level3 data converter.
factoid
A project to capture biological pathway data from academic papers
factoid-converters
Web services for Factoid project to convert between JSON, BioPAX, SBGN data formats
golist
Programming task for software developers
grounding-search
A biological entity grounding search service
guide
Resource for pathway analysis and Pathway Commons
hyper-recent
Hyper-recent article feed
keggtranslator
A Java-based software for visualizing and translating the KEGG PATHWAY database. Conversion of KGML files into BioPAX, SBML, GraphML, GML, and various other formats.
mirtarbase-to-biopax
MiRTarBase to BioPAX Level3 data converter.
msigdb-to-biopax
MSigDB (human C3 TFT motif gene sets only) to BioPAX Level3 data converter.
ncbiutils
A wrapper for retrieving records from PubMed
networks
A web app to search sub-networks in Pathway Commons
nms
Neighborhood Maps Server for cPath1 (PC)
path-stat
NodeJS Tool for scraping Pathway Commons for statistical analysis
pathguide
The pathway resource list
pathway-abstract-classifier
A tool to classify journal abstracts with pathway content.
pathway-cards
Recommend Projects
-
React
A declarative, efficient, and flexible JavaScript library for building user interfaces.
-
Vue.js
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
-
Typescript
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
-
TensorFlow
An Open Source Machine Learning Framework for Everyone
-
Django
The Web framework for perfectionists with deadlines.
-
Laravel
A PHP framework for web artisans
-
D3
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
-
Recommend Topics
-
javascript
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
-
web
Some thing interesting about web. New door for the world.
-
server
A server is a program made to process requests and deliver data to clients.
-
Machine learning
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
-
Visualization
Some thing interesting about visualization, use data art
-
Game
Some thing interesting about game, make everyone happy.
Recommend Org
-
Facebook
We are working to build community through open source technology. NB: members must have two-factor auth.
-
Microsoft
Open source projects and samples from Microsoft.
-
Google
Google ❤️ Open Source for everyone.
-
Alibaba
Alibaba Open Source for everyone
-
D3
Data-Driven Documents codes.
-
Tencent
China tencent open source team.