Comments (2)
FTP & HTTP support are both available, I just haven't made a big announcement or documented yet - precisely for reasons like this. It works most of the time just fine, but there's still the occasional quirk that keeps me from fully feeling comfortable with publicizing it. These issues are typically tricky to reproduce, related to network traffic, I/O wait, etc. Sometimes trying the same command a few seconds later works just fine; kinda frustrating from a developer's perspective.
In any case, improving the remote I/O stability is a major item on my roadmap for the next major release (BamTools 3.0). Thanks for the feedback and compliments.
Just curious - what's the output from the failed count command? Is it an actual, explicit "error" message or just a count of zero?
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No output at all when trying to access over http. Just idles for hours.
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Related Issues (20)
- any release soon? use 2.5.1 or master? HOT 5
- Heap Overflow in BgzfStream::ReadBlock leading to code execution HOT 2
- compilation error of "bamtools_filter.cpp.o" HOT 6
- Quickly jump to a given alignment / equivalent of ftell and fseek for BamReader? HOT 1
- Conversion to SAM reports inaccurate tags HOT 4
- bamtools installation error HOT 2
- Library exits the program at an error instead of returning an error code
- Compilation fails with GCC 11 HOT 1
- Documentation URL broken HOT 1
- install_error_cmake HOT 1
- install error HOT 1
- RemoveTag caused an error message in IGV integrated genome viewer HOT 1
- Allow fetching read name field without fetching other string fields? HOT 1
- Unnecessary space in BamAlignment object?
- git clone not working HOT 2
- Is there any way to get total number of reads in the alignment bam file?
- Problem with the order of references HOT 1
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- global-buffer-overflow in BamReader_p.cpp:462:23, BamTools::Internal::BamReaderPrivate::LoadNextAlignment(BamTools::BamAlignment&)
- heap-buffer-overflow in bam/BamReader_p.cpp:507:30, BamReaderPrivate::LoadReferenceData()
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