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Philip Bradley's Projects

alphafold_finetune icon alphafold_finetune

Python code for fine-tuning AlphaFold to perform protein-peptide binding predictions

conga icon conga

Clonotype Neighbor Graph Analysis

pubtcrs icon pubtcrs

This repository contains C++ source code for TCR clustering and correlation analysis

repdist icon repdist

Software for comparing T cell receptor (TCR) repertoires

tcr-dist icon tcr-dist

Software tools for the analysis of epitope-specific T cell receptor (TCR) repertoires (scroll down for the README)

tcr-gwas icon tcr-gwas

Collaboration to find genetic variation associated with TCR repertoire differences

tcrdock icon tcrdock

python tools for TCR:peptide-MHC modeling and analysis

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