Comments (2)
We should have a ticket dedicated to text mining activities. Should I move this to the monarch-phenote tracker for now?
The grid+checkbox thing is a good idea, we would like to have this more generally, e.g. genes rather than patients, and any kind of functional or phenotypic assignment as columns, do we plan to do something like this for either tpc or seeding initialization @kltm @hdietze?
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spoke to @pnrobinson , the phenpacket requirement here is the ability to represent this faithfully:
http://www.cell.com/ajhg/fulltext/S0002-9297%2810%2900519-7
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Related Issues (20)
- Is generated protobuf schema useful? HOT 2
- Add links to presentations in README
- date/time formats HOT 1
- Map to RSML
- Add example for representing when an entity is a model of a disease
- Rename 'type' HOT 14
- doi link is broken
- Add doc for how species vs. organism instances are represented HOT 1
- Define mapping to a disease association file (DAF)
- make metabolomics example
- Use of evidence codes HOT 2
- Type of 'entity' HOT 1
- Add "sample" type for entities
- Document relationship to minimal information efforts such as MIAPPE
- Info field in PXF? HOT 1
- Back reference to original sample ID from PXF?
- modeling cohort, no individual data available? HOT 2
- patient history representation
- Help with capturing some statements in PXF HOT 1
- Metadata.html
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