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plger avatar plger commented on June 19, 2024

Hi,
Thanks for reporting, but please always include the package version with issues!
With multi-threading we won't get very useful error msgs, so could you run it without the BPPARAM argument? Assuming you still encounter the error, use traceback() right after to get its trace.
Pierre-Luc

from scdblfinder.

LTLA avatar LTLA commented on June 19, 2024

Usually this kind of cryptic error means that you ran out of memory on one of the worker processes. On my systems, I often observe this because the OS will kill individual workers when R exceeds the allocated memory; this means that some workers will finish and others won't, leading to weird errors like this.

from scdblfinder.

plger avatar plger commented on June 19, 2024

@debbie28 , will close this issue unless you want to follow up on it.

from scdblfinder.

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