Related Issues (20)
- AttributeError: module '__main__' has no attribute '__spec__' HOT 2
- bootscan: use tempfile instead of writing .h5 files to user dir
- Expose Scanner object to Python interface
- DNA_ALPHABET does not include IUPAC symbols HOT 5
- Remove of identical sequences may cause names to go out of sync
- Update unit tests HOT 8
- Make Triplet a generator? HOT 3
- Memory consumption, speed benchmarking
- Discordance between OpenRDP and RDP v5.5 HOT 9
- Reconciling recombination events
- Other metrics to determine which sequence is recombinant
- Refining breakpoints with HMM
- Update README with instructions on how to use Docker image
- UnboundLocalError in both master and dev branch HOT 2
- should trim the sequence before I run OpenRDP? HOT 1
- install error HOT 6
- OpenRDP run slow, Can I speed it up? HOT 4
- How to prepare sequences for recombination analysis? HOT 2
- detect recombination breakpoints in a query sequence by comparing it against a reference set. HOT 5
- 3Seq method not running on windows 11 HOT 3
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