ppflrs Goto Github PK

2014-5-metagenomics-workshop

Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm

anvio

An analysis and visualization platform for 'omics data

diamond

Accelerated BLAST compatible local sequence aligner.

ecohnet

github-for-developers-7

homebrew-core

🍻 Default formulae for the missing package manager for macOS

homebrew-science

:microscope: Scientific formulae for the Homebrew package manager

mermaids

metassemble

Scripts to run several metagenomics assembly programs

mpipz_bit_thesis

thesis code

notes

Miscellaneous config files and notes

p-tim68

pandas

Flexible and powerful data analysis / manipulation library for Python, providing labeled data structures similar to R data.frame objects, statistical functions, and much more

ppflrs.github.io

My Bootstrap 4 resume.

probabilistic-programming-and-bayesian-methods-for-hackers

aka "Bayesian Methods for Hackers": An introduction to Bayesian methods + probabilistic programming with a computation/understanding-first, mathematics-second point of view. All in pure Python ;)

prokka

:zap: :aquarius: Rapid prokaryotic genome annotation

radiohead

Repository of code for Radiohead's "House of Cards" music video.

rescience.github.io

ReScience website sources

rrobot

R Package to write Tecan EvoWare Worklists & read Data from Tecan iControl XML

rtg-core

RTG Core: Software for alignment and analysis of next-gen sequencing data.

scilifelab.github.io

Web portal for open source (research) projects at SciLifeLab

scripts

Various scripts, bioinformatic pipelines, etc

shinymc

R Shiny based interface for monitoring bioreactors

springboardcapstone_yelpanalysis

Code for Springboard Capstone Project -- Analyzing 2 proposed tweaks to the Yelp rating system

tim_explorer

tm_cyanophages

Scripts used in the analysis of the paper: "A novel oceanic uncultured temperate cyanophage lineage"

toolbox

Tools for day to day bioinformatics work

training-prep-2015-09

Instructor training preparation, September 2015

vfads

Scripts used in the analysis of the paper: "Cyanophage-encoded lipid-desaturases: oceanic distribution, diversity and function"

virfinder

VirFinder: a novel k-mer based tool for identifying viral sequences from assembled metagenomic data