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Julien Prados's Projects

bcalm icon bcalm

compacted de Bruijn graph construction in low memory

bmrm icon bmrm

R package implementing Bundle Method for Regularized Risk Minimization

bwttools icon bwttools

An attempt to create a bwttools from SGA source code

docker icon docker

A repository for my docker services

docker_sindbis icon docker_sindbis

Pipeline to process sequencing reads of SINDBIS virus to study connectome

emote icon emote

R package to analyse NGS data resulting from EMOTE protocol

klib icon klib

A standalone and lightweight C library

kmc icon kmc

Fast and frugal disk based k-mer counter

lwlogo icon lwlogo

Interpréteur Logo en Javascript

ropebwt2 icon ropebwt2

Incremental construction of FM-index for DNA sequences

sga icon sga

de novo sequence assembler using string graphs

valley icon valley

An R package implementing an algorithms to find valleys in a graph

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