progenetix Goto Github PK

arraymap2ga4gh

Schema examples

beaconplus-legacy

beaconplus v1.n server libraries (to be replaced by bycon)

beaconplus-server

server cgi for Beacon+ development

beaconplus-ui

Beacon+ - Interface for the Beacon+ Server (replaced in progenetix-next for bycon / Beacon+ v2.n)

beaconplus-web

Web frontend for the bycon implementation of the Beacon v2 API

bycon

Bycon - A Python Based Beacon API (beacon-project.io) implementation leveraging the Progenetix (progenetix.org) data model

byconaut

Scripts for genomic data manipulation based on the bycon package

byconeer

Applications and utilities for (Progenetix) data import, access & processing - extensions to `bycon`

cancercelllines-web

Web frontend for the Cancercelllines genome resource - a Progenetix project

icdontologies

ICDOntologies repository provides mappings for combinations of ICD-O 3 Morphology and Topography codes to NCIt neoplasm core classes.

icdot2uberon

The icdot2uberon project provides mappings between ICD-O disease loci and UBERON anatomical structures

oncopubs

Submission repository for articles to be included in the Progenetix publication collection of cancer genome profiling studies

pgx

Genome profile visualisation for arrayMap and Progenetix

pgxconnections

A simple plot cgi for visualizing connections, e.g. between collaborators (Circos inspired)

pgxdb

Perl module for arrayMap and Progenetix resource updates

pgxmaps

Some Perlish data to map projections

pgxrpi

progenetix-site-template

Templates & guides for Jekyll based websites

progenetix-web

Web frontend for the Progenetix cancer genome resource

progenetix.github.io-legacy

info.progenetix.org website

publication-schema

publications

schemas-legacy

data schemas for the Progenetix databases