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pvnlubenia's Projects

acorns-matlab- icon acorns-matlab-

MATLAB code for absolute concentration robustness of networks of Shinar-Feinberg type [acr.m is placed on this page as a preview of the code; the same file is included in ACORNS-Matlab-.zip]

acorns-octave- icon acorns-octave-

Octave code for absolute concentration robustness of networks of Shinar-Feinberg type [acr.m is placed on this page as a preview of the code; the same file is included in ACORNS-Octave-.zip]

baroness-matlab- icon baroness-matlab-

MATLAB code for basis for the orthogonal complement of the stoichiometric subspace of a network [basisOrthComp.m is placed on this page as a preview of the code; the same file is included in BARONESS-Matlab-.zip]

checkmate-matlab- icon checkmate-matlab-

MATLAB code for generating the ordinary differential equations of a mass action system [CRNtoMAS.m is placed on this page as a preview of the code; the same file is included in CHECKMATE-MATLAB-.zip]

clams-matlab- icon clams-matlab-

MATLAB code for generating the conservation laws of a system [conservationLaw.m is placed on this page as a preview of the code; the same file is included in CLAMS-MATLAB-.zip]

compiles icon compiles

COMPILES: Computational package for COMPutIng anaLytic positivE Steady states. steadyState.m is placed on this page as a preview of the code; the same file is included in COMPILES.zip

cranberry-matlab- icon cranberry-matlab-

MATLAB code for network numbers of chemical reaction networks [networkNumbers.m is placed on this page as a preview of the code; the same file is included in CRANBERRY-Matlab-.zip]

cranberry-octave- icon cranberry-octave-

Octave code for network numbers of chemical reaction networks [network_numbers.m is placed on this page as a preview of the code; the same file is included in CRANBERRY-Octave-.zip]

decent-matlab- icon decent-matlab-

MATLAB codes for decompositions with network numbers of a chemical reaction network [the four MATLAB functions are placed on this page as previews of the codes; the same files are included in DECENT-MATLAB-.zip]

desire-matlab- icon desire-matlab-

MATLAB code for directed spanning tree away from and towards a vertex [directedSpanTreeAway.m and directedSpanTreeTowards.m are placed on this page as a previews of the code; the same files are included in DESIRE-Matlab-.zip]

incidents-matlab- icon incidents-matlab-

MATLAB code for the finest incidence independent decomposition of a chemical reaction network [incidenceIndepDecomp.m is placed on this page as a preview of the code; the same file is included in INCIDENTS-MATLAB-.zip]

indecs-matlab- icon indecs-matlab-

MATLAB code for independent decomposition of chemical reaction networks [indepDecomp.m is placed on this page as a preview of the code; the same file is included in INDECS-Matlab-.zip]

indecs-octave- icon indecs-octave-

Octave code for independent decomposition of chemical reaction networks [indep_decomp.m is placed on this page as a preview of the code; the same file is included in INDECS-Octave-.zip]

modern-matlab- icon modern-matlab-

MATLAB code for converting a mass action ordinary differential equation system to a chemical reaction network [odeToCRN.m is placed on this page as a preview of the code; the same file is included in MODERN-Matlab-.zip]

modern-octave- icon modern-octave-

Octave code for converting a mass action ordinary differential equation system to a chemical reaction network [ode_to_crn.m is placed on this page as a preview of the code; the same file is included in MODERN-Octave-.zip]

passive-matlab- icon passive-matlab-

MATLAB code for determining if a power law system is injective [PLKinjective.m and PLKinjectiveLU.m are placed on this page as a preview of the codes; the same files are included in PASSIVE-MATLAB-.zip]

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