Comments (5)
"Directory of Methods [high]" and "Doc Version Archive [enhancement]" are complete and live on https://docs.qiime2.org.
The plugin/method directory (e.g. similar to QIIME 1's script index page) is at https://docs.qiime2.org/2.0.6/plugins/available/. The docs site has versioned docs for each QIIME 2 train release, and the wiki docs have been ported into the main site. Currently, you can provide the version number in the URL to view docs for a specific QIIME 2 version (e.g. https://docs.qiime2.org/2.0.5/), and we'll add a menu to easily switch between doc versions in the future.
See this forum post for more details about the latest website updates.
I'll edit the above post to indicate what items are completed.
from docs.
Hey Jai, what's the best place to put tutorials?
For example, Greg's uchime-denovo tutorial is only on the fourms, but not on the docs. A forum member didn't find this tutorial and at first, neither did I!
Let me know the documentation strategy. Also let me know if I should move this to developer discussion on the forums.
EDIT: OK! See: https://forum.qiime2.org/t/whats-the-best-place-to-post-tutorials/
from docs.
Hi @colinbrislawn! Can you please post this on the forum's Developer Discussion category, that way we don't clutter up this issue with discussion?
from docs.
While I was searching for an issue about #297, which I couldn't find and created that, I came across this one. While reading this I see an overlap between some of these open points and the latest documentation changes we have done for Qiita. For example:
- Glossary
- Alpha diversity, with references to each method
Anyway, this can be the main guide for that tentative transition of documentation that we talked about: @gregcaporaso & @ebolyen
from docs.
Is this the documentation lifecycle you are suggesting?
- notice pattern of questions, and identify need for a guide / tutorial
- write guide / tutorial and post it to the community tutorials forum
- formalize guide and submit a PR to qiime2/docs/
Colin
from docs.
Related Issues (20)
- Document inconsistencies between view tool results and q2view
- TODO: wire up sphinx-ext-qiime2
- Read-Joining tutorial data in outdated SingleEndFastqManifestPhred33 format HOT 1
- Remove observed otus/observed features note from moving pictures
- Missing q2-diversity-lib entry in install index
- PM tutorial: Taxonomic classification results are the same before and after retraining the classifier HOT 2
- Newer versions of pip are problematic when installing q2studio HOT 2
- PD Mice Typo: HOT 3
- Need URL to Latest Qiime2 Docs HOT 2
- Update the read joining tutorial
- OTU clustering tutorial: closed-ref description is outdated HOT 1
- ENH: Filtering Tutorial to include SampleData
- Installation through `mamba` HOT 2
- Support generating docs for Semantic Types, Formats, and Transformers
- Tiny typo on QIIME 2 Cancer Microbiome Intervention Tutorial main page HOT 2
- migrate (or just remove) "Developing a QIIME 2 plugin" page HOT 1
- BUG: broken link in importing data tutorial HOT 3
- add link to installation docs suggesting to search the forum when troubleshooting
- Following installation instructions results in wget error on macOS HOT 6
- MAINT: `cluster-features-denovo` tutorial needs new `--p-strand` param added HOT 2
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