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Name: Qianqian Song
Type: User
Company: University of Florida
Bio: Biomedical informatics, Bioinformatics, Computational Biology
Twitter: Sophie_QSong
Location: FL, USA
Name: Qianqian Song
Type: User
Company: University of Florida
Bio: Biomedical informatics, Bioinformatics, Computational Biology
Twitter: Sophie_QSong
Location: FL, USA
Knowledge graph enhanced LLM for binding affinity prediction
Uncovering the dynamic effects of DEX treatment on lung cancer by integrating bioinformatic inference and multiscale modeling of scRNA-seq and proteomics data
R Codebase for BISCUIT: Infinite Mixture Model to cluster and impute single cells.
R package to infer spatial location of neuronal subpopulations within the developing mouse brain by integrating single-cell RNA-seq data with in situ RNA patterns from the Allen Developing Mouse Brain Atlas
Single cell sequencing reveals the landscape of the brain metastatic microenvironment
CONICS: COpy-Number analysis In single-Cell RNA-Sequencing
DrugFormer: graph-enhanced language model to predict drug sensitivity
Deconvoluting Spatial Transcriptomics Data through Graph-based Artificial Intelligence
an empirical Bayesian framework for mutation detection from cancer genome sequencing data
Gene Expression Prediction from Histology Images via Hypergraph Neural Networks
Rmd source files for the HarvardX series PH525x
Machine learning resources
Scripts related to 450k and EPIC data analysis
Whole exome sequencing pipeline including advanced variant annotation features and automated PDF reporting.
Exome/Capture/RNASeq Pipeline Implementation using snakemake
Matlab code for machine learning algorithms in book PRML
Comprehensive Python Cheatsheet
Description of the different step in Pipeline RNAseq Single End. From fastq to count tables.
Functions for processing RNA-seq data using multiple methods. Provides consistent interfaces for normalisation, testing, visualisation etc.
scCCA: Leveraging multiple single cell datasets through CCA algorithm
scGCN is a graph convolutional networks algorithm for knowledge transfer in single cell omics
Automatic detection of consensus gene clusters across multiple single-cell datasets
scPerb: predict single-cell perturbation via style transfer-based variational autoencoder
Single-Cell Sequencing Quality Control and Processing Software
Single-cell spatial elucidation through image-augmented graph transformer
SMGR: a joint statistical method for integrative analysis of single-cell multi-omics data
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.