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abebooks

A Python wrapper to AbeBooks REST API

biolink-model

Schema and generated objects for biolink data model and upper ontology

biothings.api

BioThings API framework - Making high-performance API for biological annotation data

biothings_docker

cadd-workflows

cancionero

A GTK-based desktop application for browsing song chords

charmm-pdbqt

Script to generate a pdbqt file using the charges from CHARMM

clustercv

Cluster-cross-validation for ligand-based models

crcpred

ML models with metabolomics and microbiomics data for colorectal cancer prediction

cypherbox

A small Qt application that handles coding / decoding text in a Caesar cypher.

ddt

A toolkit for drug discovery research

dgidb

API for drug-gene interactions in DGIdb.

dm3-to-mrc-converter

A shell script for converting .dm3 micrographs to .mrc format using the nautilus/nemo GUI

dotfiles

My config files, and a script to install them.

dtipred

Experiments with drug-target interaction prediction from genomic and chemical data.

dud-e_roc

Receiver operating characteristic (ROC) analysis for evaluating scoring functions with DUD-E

echotags

A python program for tagging mp3 files with EchoNest acoustic attributes.

exploring-dti-networks

CS 5362 Spring 2018 semester project

fda_orphan_drug

fios_speed_test

Wraps Verizon Fios speed test API to get router upload/download speeds.

funwithbooks

Messing around with NLP and my Calibre library

galactic-data

Just a data

giant-viruses

github-actions-s3-test

github_oauth_test

go

Parser for gene ontology gene sets

hugin-scan-stitcher

A script for automatically stitching scanned art/documents with Hugin.

instagram_network_analysis

jekyll-text-theme

💎 🐳 A super customizable Jekyll theme for personal site, team site, blog, project, documentation, etc.

knowledgebase