Name: Richard Allen White III
Type: User
Company: RAW Molecular Systems LLC & UNC Charlotte
Bio: Multiomics of complex microbiomes (Soil, Rhizosphere, Microbialites, Humans).
Twitter: raw9371
Location: Concord, NC
Blog: www.rawmolecularsystems.com
Richard Allen White III's Projects
An analysis and visualization platform for 'omics data
Beta version of ATLAS in the sean-dev branch.
From Pre-print. ATLAS (Automatic Tool for Local Assembly Structures) - a comprehensive infrastructure for assembly, annotation, and genomic binning of metagenomic and metatranscriptomic data
Bacterial Population Genomics Special Topics Course PLP 512: Special Topics in Plant Pathology (1 unit), Washington State University
Command line tool to split a file into chunks of user-specified size, respecting delimitted breaks.
List of Data Science Cheatsheets to rule the world
Repository for "Introduction to Artificial Neural Networks and Deep Learning: A Practical Guide with Applications in Python"
Metagenomics and metatranscriptomics workshop -Forestry and Agricultural Biotechnology Insititute (FABI), University of Pretoria, South Africa, 22-26 OctoberΒ 2018
script to run FOAM
MerCat: python code for versatile k-mer counting and diversity estimation for database independent property analysis for meta -ome data
Metagenomics Workshop 2014-5-21 to 2014-5-23 at SciLifeLab, Stockholm
centos version
One liners and useful scripts for computational biology
A collection of tutorials and examples for solving and understanding machine learning and pattern classification tasks
PLP 514 Phytobacteriology - Washington State University
Teaching materials for classes teaching programming to biologists
The "Python Machine Learning (1st edition)" book code repository and info resource
The "Python Machine Learning (2nd edition)" book code repository and info resource
microbialites stromatolites metagenomes metagenomics denovo-assembly
This is code and data associated with strain manuscript "The complete genome and physiological analysis of the microbialite-dwelling Agrococcus pavilionensis sp. nov; reveals genetic promiscuity and predicted adaptations to environmental stress" Frontiers
This is code and data associated with strain manuscript "The complete genome and physiological analysis of the eurythermal firmicute Exiguobacterium chiriqhucha strain RW2 isolated from a freshwater microbialite, widely adaptable to broad thermal, pH and salinity ranges" Frontiers