Giter Site home page Giter Site logo

animalPlaceOfContact about ppi HOT 6 CLOSED

rebipp avatar rebipp commented on May 31, 2024
animalPlaceOfContact

from ppi.

Comments (6)

fonturbel avatar fonturbel commented on May 31, 2024

This needs a further revision from a specialist

from ppi.

carmensspires avatar carmensspires commented on May 31, 2024

As we are trying to make inferences about which floral visitors would have the potential to be pollinators, I believe that we should specify in the definition the parts of the flower that are touched.

Definition proposals:
A list (concatenated and separated) of places (i.e. body parts) of the animal body that contacts anther and stigma of its interacting partner during an Interaction.

Or

A list (concatenated and separated) of places (i.e. body parts) of the animal body that contacts anthers and stigma during an Interaction.

Or

A list (concatenated and separated) of places (i.e. body parts) of the animal body that contacts reproductive parts of the flower during an Interaction.

from ppi.

zedomel avatar zedomel commented on May 31, 2024

@carmensspires I don't know if we need to include the parts of the flower in the definition.

It will restrict the usage of the term to only floral parts, opposed to allow a generic usage where the animal touches another parts of the plant (leaf, trunk, etc).

By the way, the floral parts when touched must be specified using the term plantPlaceOfContact(#31). Using the term placePlaceOfContact one can specify values as: anther or stigma.

from ppi.

Mardiore avatar Mardiore commented on May 31, 2024

If the intention is to record interactions (regardless of whether they result in pollination or not) I agree that it is better not to mention specific parts of the plant, such as floral structures.

from ppi.

anselmoeco avatar anselmoeco commented on May 31, 2024

I agree with @zedomel and @Mardiore. However, if we want to at least refer to the interactions between animals and plants, we could then use something like: "A list (concatenated and separated) of places (i.e. body parts) of the animal body that contacts the plant partner during an Interaction".

from ppi.

zedomel avatar zedomel commented on May 31, 2024

New definition: A list (concatenated and separated) of animal's body parts that contacts the plant

Removed partner during an Interaction since it the interaction with a plant is implicit here (Interaction class)

from ppi.

Related Issues (20)

Recommend Projects

  • React photo React

    A declarative, efficient, and flexible JavaScript library for building user interfaces.

  • Vue.js photo Vue.js

    🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.

  • Typescript photo Typescript

    TypeScript is a superset of JavaScript that compiles to clean JavaScript output.

  • TensorFlow photo TensorFlow

    An Open Source Machine Learning Framework for Everyone

  • Django photo Django

    The Web framework for perfectionists with deadlines.

  • D3 photo D3

    Bring data to life with SVG, Canvas and HTML. 📊📈🎉

Recommend Topics

  • javascript

    JavaScript (JS) is a lightweight interpreted programming language with first-class functions.

  • web

    Some thing interesting about web. New door for the world.

  • server

    A server is a program made to process requests and deliver data to clients.

  • Machine learning

    Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.

  • Game

    Some thing interesting about game, make everyone happy.

Recommend Org

  • Facebook photo Facebook

    We are working to build community through open source technology. NB: members must have two-factor auth.

  • Microsoft photo Microsoft

    Open source projects and samples from Microsoft.

  • Google photo Google

    Google ❤️ Open Source for everyone.

  • D3 photo D3

    Data-Driven Documents codes.