reedacartwright Goto Github PK

2021-08-02-ttt-online-pdt

2022-01-04-ttt-online-asu

Carpentries Instructor Training on Jan 4-5, 2022 at ASU

accumulate

code for calling mutatons from MA lines

accurate_algorithms

Algorithms for the accurate computation of sums and dot products.

adamjorr-talks

Talks I've given

analysis

Analysis of inference methods on standard population models

archinformatics

Arch Linux PKGBUILDs for Bioinformatics

arraylayout

Experiments with the Van Emde Boas ordered array layout

ben_thesis

Ben's Honors Thesis

bossmachine

Bioinformatics Open Source Sequence machine

cli11

CLI11 is a command line parser for C++11 and beyond that provides a rich feature set with a simple and intuitive interface.

coati

Codon-Aware Multiple Sequence Alignments

count_shulker_boxes

Measure production of Minecraft farms

cppnumericalsolvers

L-BFGS-B and other optimization implementation in pure C++11 using Eigen

cubiomes

C library that mimics the Minecraft biome generation.

dawg

Simulating Sequence Evolution

denovogear

A program to detect denovo-variants using next-generation sequencing data. (http://www.nature.com/nmeth/journal/v10/n10/full/nmeth.2611.html)

emdel

SMUVE Software from Cartwright (2009) doi:10.1093/molbev/msn275

etherpad-lite

Etherpad: Really real-time collaborative document editing

follow_iron_golems

A behavior pack for Mincraft (Bedrock) that tracks statistics useful for iron farms.

fontpro

LaTeX support for Adobe's Pro opentype fonts: Minion Pro, Myriad Pro, Cronos Pro and possibly more

ga-pipeline-1

ga-pipeline-1-old

gamgee

A C++14 library for NGS data formats

genomic-analysis

Practice Repository for Genomic Analysis Course

humanidiogramlibrary

Resource of human chromosome schematics & images

ibd

ideapad-hacks

Yoga 920 fn-lock and conservation mode acpi platform driver

jak

khmer

In-memory nucleotide sequence k-mer counting, filtering, graph traversal and more