Comments (3)
HannesWuensche
commented on July 20, 2024
1
Hallo @icestorm972,
vielen Dank für den Hinweis.
Nach Rücksprache mit den Kolleg:innen kann ich folgende Rückmeldungen geben:
Um das Problem zu umgehen, werden wir in naher Zukunft Scorpio nicht mehr nutzen. Derzeitig sind wir noch dabei die neue Zuordnungsstrategie zu testen und zu evaluieren. Geplant ist, dass sich die Linienzuordnungen so "von allein" heilen und nur noch die Usherzuordnung genutzt werden.
Mit besten Grüßen
@HannesWuensche
für das Team RKI | Open Data
from sars-cov-2-sequenzdaten_aus_deutschland.
icestorm972
commented on July 20, 2024
Super :-)
Wenn ich das richtig gesehen habe, ist das jetzt live?
Btw, seit Samstag gab es keine neuen Sequenzen mehr?
from sars-cov-2-sequenzdaten_aus_deutschland.
HannesWuensche
commented on July 20, 2024
Hallo @icestorm972,
ich habe des Thema in cov-lineages/pango-designation#26 aufgenommen.
Beste Grüße
@HannesWuensche
für das Team RKI | Open Data
from sars-cov-2-sequenzdaten_aus_deutschland.
Related Issues (20)
- Potentially misdated sequences from Berlin uploaded to GISAID by RKI today HOT 1
- Fehlende Sequenz-/Metadaten (csv/fasta) Uploads ab 2022-09-27 HOT 4
- Using nextclade for pango lineage classification HOT 3
- Pipeline scheint wieder zu hängen HOT 1
- Trouble importing zipped csv into R HOT 3
- SARS-CoV-2-Sequenzdaten_Deutschland.fasta.xz - CRC-Fehler / Defektes Archiv HOT 4
- What does the "." denote in the FASTA files?
- Update 2022-12-14/15 für SARS-CoV-2-Sequenzdaten_Deutschland.csv/fasta.xz ausgefallen
- Keine Updates für SARS-CoV-2-Sequenzdaten_Deutschland csv/fasta seit 2022-12-31 HOT 1
- Sudden increase in artefactual mutations in sequences from Germany HOT 1
- Pipeline Probleme oder keine neue Daten mehr? HOT 1
- Update on the reporting of SARS-CoV-2 variants after the expiration of the Coronavirus Surveillance Regulation HOT 3
- Submission date lost for many sequences: SEQUENCE.PUSHED_TO_DWH empty for 1.099m out of 1.228m rows HOT 3
- README contains unclear explanation for meaning of SEQUENCING_REASON field HOT 1
- Update 2023-09-25?
- 2023-10-09? HOT 1
- IMS-10285-CVDP-18B5CDB7-673D-47A6-984F-0BF3CF7F7DDF HOT 2
- (Auto-)Updates of Metadata Files Missing (zenodo.json, govdata.ttl, nfdi4health.json) HOT 1
- Update 2024-01-17 HOT 2
- Update 2024-03-20 - fasta.xz not updated HOT 1
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