Comments (1)
MarieLataretu
commented on June 19, 2024
Hi @corneliusroemer ,
thanks again for reporting!
Here, it also looks like a (sequencing) lab bias in the DESH data.
We are in contact with the lab.
from sars-cov-2-sequenzdaten_aus_deutschland.
Related Issues (20)
- Fehlende Sequenzdaten (csv/fasta) Uploads ab 2022-09-19 HOT 3
- Potentially misdated sequences from Berlin uploaded to GISAID by RKI today HOT 1
- Fehlende Sequenz-/Metadaten (csv/fasta) Uploads ab 2022-09-27 HOT 4
- Using nextclade for pango lineage classification HOT 3
- Pipeline scheint wieder zu hängen HOT 1
- Trouble importing zipped csv into R HOT 3
- SARS-CoV-2-Sequenzdaten_Deutschland.fasta.xz - CRC-Fehler / Defektes Archiv HOT 4
- What does the "." denote in the FASTA files?
- Update 2022-12-14/15 für SARS-CoV-2-Sequenzdaten_Deutschland.csv/fasta.xz ausgefallen
- Keine Updates für SARS-CoV-2-Sequenzdaten_Deutschland csv/fasta seit 2022-12-31 HOT 1
- Sudden increase in artefactual mutations in sequences from Germany HOT 1
- Pipeline Probleme oder keine neue Daten mehr? HOT 1
- Update on the reporting of SARS-CoV-2 variants after the expiration of the Coronavirus Surveillance Regulation HOT 3
- Submission date lost for many sequences: SEQUENCE.PUSHED_TO_DWH empty for 1.099m out of 1.228m rows HOT 3
- README contains unclear explanation for meaning of SEQUENCING_REASON field HOT 1
- Update 2023-09-25?
- 2023-10-09? HOT 1
- IMS-10285-CVDP-18B5CDB7-673D-47A6-984F-0BF3CF7F7DDF HOT 2
- (Auto-)Updates of Metadata Files Missing (zenodo.json, govdata.ttl, nfdi4health.json) HOT 1
- Update 2024-01-17 HOT 2
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from sars-cov-2-sequenzdaten_aus_deutschland.