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Name: Rodrigo Ochoa
Type: User
Bio: Bioengineer, MSc in Basic Biomedical Sciences and PhD in Chemical Sciences, with experience in Bioinformatics, Cheminformatics, Modeling and Computational Tools
Twitter: raod85
Name: Rodrigo Ochoa
Type: User
Bio: Bioengineer, MSc in Basic Biomedical Sciences and PhD in Chemical Sciences, with experience in Bioinformatics, Cheminformatics, Modeling and Computational Tools
Twitter: raod85
OFFICIAL: AnteChamber PYthon Parser interfacE
Open source code for AlphaFold.
fork of autodock vina, from http://vina.scripps.edu/
The Binding Affinity Tool (BAT.py) is a fully automated tool for absolute binding free energy calculations on protein-ligand systems.
A python workflow to set up BEDAM binding free energy calculations
Script to manipulate BILN format and convert it to HELM (and viceversa)
BioJava is an open-source project dedicated to providing a Java framework for processing biological data.
Core BioPerl 1.x code
Library for biomedical knowledge manipulation
API for interacting with ChatGPT using Python and from Shell.
The C++ Core Guidelines are a set of tried-and-true guidelines, rules, and best practices about coding in C++
Additional supplementary information
Code related to : O. Mendez-Lucio, M. Ahmad, E.A. del Rio-Chanona, J.K. Wegner, A Geometric Deep Learning Approach to Predict Binding Conformations of Bioactive Molecules
Audio fingerprinting and recognition in Python
Implementation of DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking
dockECR: open consensus docking and ranking protocol for virtual screening of small molecules
Functional Therapeutic Chemical Classification System
MM-PBSA method for GROMACS. For full description, please visit homepage:
Repository for HELM Editor project
Repository for HELM Notation Toolkit project
HotCRP conference review software
A generalized implementation of Kolmogorov-Smirnov enrichment testing for computational drug repositioning.
MaSIF- Molecular surface interaction fingerprints. Geometric deep learning to decipher patterns in molecular surfaces.
Package to predict core region of peptides bound to MHC class II structure, model new peptides and run simulations
Webpage Modelamiento Molecular Colombia
Package to model peptide substrates bound to annotated protease structures and run promiscuity analysis
A declarative, efficient, and flexible JavaScript library for building user interfaces.
🖖 Vue.js is a progressive, incrementally-adoptable JavaScript framework for building UI on the web.
TypeScript is a superset of JavaScript that compiles to clean JavaScript output.
An Open Source Machine Learning Framework for Everyone
The Web framework for perfectionists with deadlines.
A PHP framework for web artisans
Bring data to life with SVG, Canvas and HTML. 📊📈🎉
JavaScript (JS) is a lightweight interpreted programming language with first-class functions.
Some thing interesting about web. New door for the world.
A server is a program made to process requests and deliver data to clients.
Machine learning is a way of modeling and interpreting data that allows a piece of software to respond intelligently.
Some thing interesting about visualization, use data art
Some thing interesting about game, make everyone happy.
We are working to build community through open source technology. NB: members must have two-factor auth.
Open source projects and samples from Microsoft.
Google ❤️ Open Source for everyone.
Alibaba Open Source for everyone
Data-Driven Documents codes.
China tencent open source team.